Index A | B | C | D | E | F | G | I | J | L | M | N | P | R | S | T | U | V | W | X A addBackground() (API.projectClass.backgroundsClass method) (API.projectClass.projectClass method) addBackgroundParam() (API.projectClass.projectClass method) addBulkIn() (API.projectClass.projectClass method) addBulkOut() (API.projectClass.projectClass method) addContrast() (API.projectClass.projectClass method) addCustomFile() (API.projectClass.customFileClass method) (API.projectClass.projectClass method) addData() (API.projectClass.dataClass method) (API.projectClass.projectClass method) addDomainContrast() (API.projectClass.domainsClass method) addDomainRatio() (API.projectClass.domainsClass method) addFileExtension() (API.projectClass.customFileClass static method) addLayer() (API.projectClass.layersClass method) (API.projectClass.projectClass method) addLayerGroup() (API.projectClass.projectClass method) addParameter() (API.projectClass.parametersClass method) (API.projectClass.projectClass method) addParameterGroup() (API.projectClass.projectClass method) addResolution() (API.projectClass.projectClass method) (API.projectClass.resolutionsClass method) addResolutionParam() (API.projectClass.projectClass method) addScalefactor() (API.projectClass.projectClass method) allocateLayersForContrast() (in module targetFunctions.common.groupLayers) allocateParamsToLayers() (in module targetFunctions.common.groupLayers) B background (API.projectClass.projectClass attribute) backgroundsClass (class in API.projectClass) backgroundsClass() (API.projectClass.backgroundsClass method) backSort() (in module targetFunctions.common) boundHandling (API.controlsClass attribute) bulkIn (API.projectClass.projectClass attribute) bulkOut (API.projectClass.projectClass attribute) C calcSldDuringFit (API.controlsClass attribute) chiSquared() (in module targetFunctions.common.costFunctions) clone() (API.projectClass.projectClass method) contrasts (API.projectClass.projectClass attribute) contrastsClass (class in API.projectClass) contrastsClass() (API.projectClass.contrastsClass method) controlsClass (class in API) createProject() (in module API) crossoverProbability (API.controlsClass attribute) customFile (API.projectClass.projectClass attribute) customFileClass (class in API.projectClass) customFileClass() (API.projectClass.customFileClass method) D data (API.projectClass.projectClass attribute) dataClass (class in API.projectClass) dataClass() (API.projectClass.dataClass method) delete() (API.projectClass.customFileClass method) (API.projectClass.projectClass method) display (API.controlsClass attribute) displayBackgroundsObject() (API.projectClass.backgroundsClass method) displayResolutionsObject() (API.projectClass.resolutionsClass method) displayTable() (API.projectClass.customFileClass method) (API.projectClass.dataClass method) (API.projectClass.parametersClass method) domainContrasts (API.projectClass.domainsClass attribute) domainContrastsClass (class in API.projectClass) domainRatio (API.projectClass.domainsClass attribute) domainsClass (class in API.projectClass) domainsClass() (API.projectClass.domainsClass method) E extractProblemParams() (in module targetFunctions.common) F findParameter() (API.projectClass.layersClass static method) fWeight (API.controlsClass attribute) G getAllAllowedNames() (API.projectClass.domainsClass method) (API.projectClass.projectClass method) getIPCFilePath() (API.controlsClass method) getNames() (API.projectClass.backgroundsClass method) (API.projectClass.resolutionsClass method) groupLayersMod() (in module targetFunctions.common.groupLayers) groupLayersModImaginary() (in module targetFunctions.common.groupLayers) I initialiseIPC() (API.controlsClass method) J jumpProbability (API.controlsClass attribute) L layers (API.projectClass.projectClass attribute) layersClass (class in API.projectClass) layersClass() (API.projectClass.layersClass method) M maxFuncEvals (API.controlsClass attribute) maxIterations (API.controlsClass attribute) N nChains (API.controlsClass attribute) nLive (API.controlsClass attribute) nSamples (API.controlsClass attribute) nsTolerance (API.controlsClass attribute) numGenerations (API.controlsClass attribute) P parallel (API.controlsClass attribute) parameters (API.projectClass.projectClass attribute) parametersClass (class in API.projectClass) parametersClass() (API.projectClass.parametersClass method) parseCells() (in module targetFunctions.common) parseClassToStructs() (in module API) parseContrastInput() (API.projectClass.contrastsClass method) (API.projectClass.domainContrastsClass method) populationSize (API.controlsClass attribute) procedure (API.controlsClass attribute) processCustomFunction() (in module targetFunctions.domainsTF.customLayers) (in module targetFunctions.domainsTF.customXY) (in module targetFunctions.nonPolarisedTF.customLayers) (in module targetFunctions.nonPolarisedTF.customXY) projectClass (class in API.projectClass) projectClass() (API.projectClass.projectClass method) propScale (API.controlsClass attribute) R RAT() (in module API) RATMain() (in module API) reflectivityCalculation() (in module targetFunctions) removeBackground() (API.projectClass.backgroundsClass method) (API.projectClass.projectClass method) removeBackgroundParam() (API.projectClass.projectClass method) removeBulkIn() (API.projectClass.projectClass method) removeBulkOut() (API.projectClass.projectClass method) removeContrast() (API.projectClass.projectClass method) removeCustomFile() (API.projectClass.projectClass method) removeData() (API.projectClass.projectClass method) removeDomainContrast() (API.projectClass.domainsClass method) removeDomainRatio() (API.projectClass.domainsClass method) removeLayer() (API.projectClass.projectClass method) removeParameter() (API.projectClass.parametersClass method) (API.projectClass.projectClass method) removeResolution() (API.projectClass.projectClass method) (API.projectClass.resolutionsClass method) removeResolutionParam() (API.projectClass.projectClass method) removeScalefactor() (API.projectClass.projectClass method) resampleMinAngle (API.controlsClass attribute) resampleNPoints (API.controlsClass attribute) resolution (API.projectClass.projectClass attribute) resolutionsClass (class in API.projectClass) resolutionsClass() (API.projectClass.resolutionsClass method) S scalefactors (API.projectClass.projectClass attribute) sendStopEvent() (API.controlsClass method) setBackground() (API.projectClass.backgroundsClass method) (API.projectClass.projectClass method) setBackgroundName() (API.projectClass.backgroundsClass method) (API.projectClass.projectClass method) setBackgroundParam() (API.projectClass.projectClass method) setBackgroundParamLimits() (API.projectClass.projectClass method) setBackgroundParamName() (API.projectClass.projectClass method) setBackgroundParamValue() (API.projectClass.projectClass method) setBulkIn() (API.projectClass.projectClass method) setBulkOut() (API.projectClass.projectClass method) setContrast() (API.projectClass.projectClass method) setContrastModel() (API.projectClass.domainsClass method) (API.projectClass.projectClass method) setCustomFile() (API.projectClass.customFileClass method) (API.projectClass.projectClass method) setData() (API.projectClass.dataClass method) (API.projectClass.projectClass method) setDataName() (API.projectClass.dataClass method) setDefaultValues() (API.projectClass.contrastsClass static method) (API.projectClass.domainContrastsClass static method) setDomainContrast() (API.projectClass.domainsClass method) setDomainContrastModel() (API.projectClass.domainsClass method) setDomainRatio() (API.projectClass.domainsClass method) setFit() (API.projectClass.parametersClass method) setGeometry() (API.projectClass.projectClass method) setLayerValue() (API.projectClass.layersClass method) (API.projectClass.projectClass method) setLimits() (API.projectClass.parametersClass method) setModelType() (API.projectClass.domainsClass method) (API.projectClass.projectClass method) setName() (API.projectClass.parametersClass method) setParameter() (API.projectClass.parametersClass method) (API.projectClass.projectClass method) setParameterFit() (API.projectClass.projectClass method) setParameterLimits() (API.projectClass.projectClass method) setParameterName() (API.projectClass.projectClass method) setParameterPrior() (API.projectClass.projectClass method) setParameterValue() (API.projectClass.projectClass method) setPrior() (API.projectClass.parametersClass method) setProcedure() (API.controlsClass method) setResolution() (API.projectClass.projectClass method) (API.projectClass.resolutionsClass method) setResolutionName() (API.projectClass.projectClass method) (API.projectClass.resolutionsClass method) setResolutionParam() (API.projectClass.projectClass method) setResolutionParamLimits() (API.projectClass.projectClass method) setResolutionParamName() (API.projectClass.projectClass method) setResolutionParamValue() (API.projectClass.projectClass method) setScalefactor() (API.projectClass.projectClass method) setValue() (API.projectClass.parametersClass method) shiftData() (in module targetFunctions.common) strategy (API.controlsClass attribute) T targetFunctions (module) targetFunctions.common (module) targetFunctions.common.costFunctions (module) targetFunctions.common.groupLayers (module) targetFunctions.domainsTF.customLayers (module) targetFunctions.domainsTF.customXY (module) targetFunctions.nonPolarisedTF.customLayers (module) targetFunctions.nonPolarisedTF.customXY (module) targetValue (API.controlsClass attribute) toDomainsClass() (API.projectClass.projectClass method) toProjectClass() (API.projectClass.domainsClass method) toStruct() (API.projectClass.backgroundsClass method) (API.projectClass.contrastsClass method) (API.projectClass.customFileClass method) (API.projectClass.domainContrastsClass method) (API.projectClass.domainsClass method) (API.projectClass.layersClass method) (API.projectClass.parametersClass method) (API.projectClass.projectClass method) (API.projectClass.resolutionsClass method) U updateDataName() (API.projectClass.contrastsClass method) V validateData() (API.projectClass.dataClass static method) validateFunctionName() (API.projectClass.customFileClass static method) validateLimits() (API.projectClass.parametersClass static method) validatePath() (API.projectClass.customFileClass static method) validatePriors() (API.projectClass.parametersClass static method) W writeScript() (API.projectClass.projectClass method) X xTolerance (API.controlsClass attribute)
